C192884Level 4

mCode FISH Procedure

**Semantic type:** Laboratory Procedure

**Definition:** Terminology related to Fluorescence in situ Hybridization (FISH) procedures that was developed to support the efforts of Minimal Common Oncology Data Elements (mCode), a data standard designed to increase high-quality data for all cancer types.

GET/api/v1/systems/nci_thesaurus/nodes/C192884

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C193598ERBB2 Gene Duplication [Presence] in Tissue by FISH

C193648Genetic Diseases [Identifier] in Blood or Tissue by FISH Nominal

C193651X and Y Chromosome [Interpretation] in Blood or Marrow by FISH-Post Bone Marrow Transplant

C193652X-Linked Heterotaxy [Identifier] in Blood or Tissue by FISH Narrative

C193654Microdeletion Syndromes [Identifier] in Blood or Tissue by FISH Nominal

C193655Subtelomere Analysis [Identifier] in Blood or Tissue by FISH Nominal

C193656Subtelomere Analysis [Interpretation] in Blood or Tissue by FISH Narrative

C193657Microdeletion Syndromes in Specimen by FISH Nominal

C193661Microdeletion Syndromes in Blood or Tissue by FISH

C193662Chromosome Analysis Interphase [Interpretation] in Bone Marrow by FISH Narrative

C193664Chromosome Analysis Interphase [Interpretation] in Blood by FISH Narrative

C193694t(9;22)(q34.1;q11)(ABL1/BCR) Fusion Transcript in Blood or Tissue by FISH

C19369820q Chromosome Deletion [Identifier] in Blood or Tissue by FISH Nominal

C193704Chromosome Analysis Interphase [Interpretation] in Amniotic Fluid by FISH Narrative

C193705Chromosome Analysis Interphase [Interpretation] in Chorionic Villus Sample by FISH Narrative

C193708Karyotype [Identifier] in Urine by FISH Narrative

C193709CHIC2 Gene 4q12 Deletion in Blood or Tissue by FISH

C193713Chromosome 12 Aneuploidy in Amniotic Fluid or Chorionic Villus Sample by FISH Nominal

C193714Chromosome 13 and 18 and 21 and X and Y Aneuploidy in Amniotic Fluid or Chorionic Villus Sample by FISH Nominal

C193715Chromosome 13 and 18 and 21 and X and Y Aneuploidy in Blood or Tissue by FISH Nominal

C193718Chromosome 18 Aneuploidy in Amniotic Fluid or Chorionic Villus Sample by FISH Nominal

C193719Chromosome 13 Aneuploidy in Amniotic Fluid or Chorionic Villus Sample by FISH Nominal

C193721Chromosome Analysis Interphase [Interpretation] in Blood or Marrow by FISH Narrative

C1937229p21 Chromosome Deletion [Identifier] in Blood or Tissue by FISH Nominal

C193724Chromosome Analysis Interphase [Interpretation] in Specimen by FISH Narrative

C193736Karyotype [Identifier] in Blood or Tissue by FISH Narrative

C193747Chromosome Analysis Metaphase Panel - Blood by FISH

C193748Chromosome Analysis Interphase Panel - Blood by FISH

C193749Chromosome Analysis Interphase Panel - Amniotic Fluid by FISH

C193750Chromosome Analysis Prenatal Panel by FISH

C193751Chromosome Analysis Metaphase Panel - Amniotic Fluid by FISH

C193752Chromosome Analysis Panel by FISH

C193754TOP2A Gene Copy Number/Chromosome 17 Copy Number in Tissue by FISH

C193755TOP2A Gene 17q21-22 Deletion and Duplication Analysis [Presence] in Tissue by FISH

C193758MALT1 18q21 Gene Rearrangements in Blood or Tissue by FISH

C193779Subtelomere Analysis Long Arm [Interpretation] in Blood or Tissue by FISH Narrative

C193780Subtelomere Analysis Short Arm [Interpretation] in Blood or Tissue by FISH Narrative

C193781SNRPN Gene 15q11 Deletion and Duplication Analysis [Identifier] in Blood or Tissue by FISH Nominal

C193782t(11;14)(q13.2;q32)(MYEOV/IGH) Fusion Transcript [Identifier] in Blood or Tissue by FISH Nominal

C193783t(4;14)(p16;q32)(FGFR3/IGH) Fusion Transcript [Identifier] in Blood or Tissue by FISH Nominal

C193784del(13q14) [Identifier] in Blood or Tissue by FISH Nominal

C193785del(17p13) [Identifier] in Blood or Tissue by FISH Nominal

C193786dic(9;20)(p11-13;q11)(der9 and der20 Positive by Whole Chromosome Paint) [Identifier] in Blood or Tissue by FISH Nominal

C193787Staphylococcus aureus and Staphylococcus sp. Coagulase Negative rRNA [Identifier] by FISH in Positive Blood Culture

C1937884p16.3 Chromosome Deletion [Identifier] in Blood or Tissue by FISH Nominal

C193789RAI1 Gene 17p11.2 Deletion and Duplication Analysis [Identifier] in Blood or Tissue by FISH Nominal

C1937905p15.2 (5p-) Chromosome Deletion [Identifier] in Blood or Tissue by FISH Nominal

C193791MAML2 11q21 Gene Rearrangements in Tissue by FISH

C193793ERBB2 Gene Copy Number/Nucleus in Tissue by FISH

C193794Chromosome 17 Copy Number/Nucleus in Tissue by FISH

C193795ERBB2 Gene Duplication Associated Observations Panel - Tissue by FISH

C1937986p25 and 6q23 and 11q and 8q24 and 9p21 Chromosome Partial Aneuploidy in Blood or Tissue by FISH

C193800t(1;19)(q23.3;p13.3)(PBX1/TCF3) Fusion Transcript in Blood or Tissue by FISH

C193801t(15;17)(q24.1;q21.1)(PML/RARA) Fusion Transcript in Blood or Tissue by FISH

C193802t(8;14)(q24;q32)(MYC/IGH) Fusion Transcript in Blood or Tissue by FISH

C193803t(14;16)(q32;q23)(IGH/MAF) Fusion Transcript in Blood or Tissue by FISH

C193804inv(16)(p13.1;q22.1)(MYH11/CBFB) Fusion Transcript in Blood or Tissue by FISH

C193805t(14;18)(q32;q21)(IGH/MALT1) Fusion Transcript in Blood or Tissue by FISH

C193806t(11;18)(q21;q21)(BIRC3/MALT1) Fusion Transcript in Blood or Tissue by FISH

C193807t(11;14)(q13;q32)(CCND1/IGH) Fusion Transcript in Blood or Tissue by FISH

C193808t(14;18)(q32;q21.3)(IGH/BCL2) Fusion Transcript in Blood or Tissue by FISH

C193809t(12;21)(p13;q22.3)(ETV6/RUNX1) Fusion Transcript in Blood or Tissue by FISH

C193810t(8;21)(q22;q22.3)(RUNX1T1/RUNX1) Fusion Transcript in Blood or Tissue by FISH

C193811inv(3)(q21;q26.2) and t(3;3)(q21;q26.2) Fusion Transcript in Blood or Tissue by FISH

C193812t(6;9)(p22;q34)(DEK/NUP214) Fusion Transcript in Blood or Tissue by FISH

C1938134q12 Chromosome Region Rearrangements [Identifier] in Blood or Tissue by FISH Nominal

C1938149q34 Chromosome Region Deletion [Presence] in Blood or Tissue by FISH

C193815BCL6 Gene Rearrangements [Presence] in Blood or Tissue by FISH

C193816CCND1 Gene Duplication [Presence] in Blood or Tissue by FISH

C193817ALK Gene Rearrangements [Presence] in Blood or Tissue by FISH

C1938184q12 Chromosome Region Rearrangements [Interpretation] in Blood or Tissue by FISH Narrative

C1938199q34 Chromosome Region Deletion [Interpretation] in Blood or Tissue by FISH Narrative

C193820BCL6 Gene Rearrangements [Interpretation] in Blood or Tissue by FISH Narrative

C193821CCND1 Gene Duplication [Interpretation] in Blood or Tissue by FISH Narrative

C193822ALK Gene Rearrangements [Interpretation] in Blood or Tissue by FISH Narrative

C193823Cells with 4q12 Chromosome Region Rearrangements/Cells Counted in Blood or Tissue by FISH

C193824Cells with 9q34 Chromosome Region Deletion/Cells Counted in Blood or Tissue by FISH

C193825Cells with BCL6 Gene Rearrangements/Cells Counted in Blood or Tissue by FISH

C193826Cells with CCND1 Gene Duplication/Cells Counted in Blood or Tissue by FISH

C193827MYC Gene Rearrangements [Presence] in Blood or Tissue by FISH

C193828TRA and TRD Gene Rearrangements [Presence] in Blood or Tissue by FISH

C193829RARA Gene Rearrangements [Presence] in Blood or Tissue by FISH

C193830BCL2 Gene Rearrangements [Presence] in Blood or Tissue by FISH

C193831KMT2A Gene Rearrangements [Presence] in Blood or Tissue by FISH

C193832PDGFRB Gene Rearrangements [Presence] in Blood or Tissue by FISH

C193833IGH Gene Rearrangements [Presence] in Blood or Tissue by FISH

C193834MYC Gene Rearrangements [Interpretation] in Blood or Tissue by FISH Narrative

C193835TRA and TRD Gene Rearrangements [Interpretation] in Blood or Tissue by FISH Narrative

C193836RARA Gene Rearrangements [Interpretation] in Blood or Tissue by FISH Narrative

C193837BCL2 Gene Rearrangements [Interpretation] in Blood or Tissue by FISH Narrative

C193838KMT2A Gene Rearrangements [Interpretation] in Blood or Tissue by FISH Narrative

C193839PDGFRB Gene Rearrangements [Interpretation] in Blood or Tissue by FISH Narrative

C193840IGH Gene Rearrangements [Interpretation] in Blood or Tissue by FISH Narrative

C193841Cells with MYC Gene Rearrangements/Cells Counted in Blood or Tissue by FISH

C193842Cells with RARA Gene Rearrangements/Cells Counted in Blood or Tissue by FISH

C193843Cells with TRA and TRD Gene Rearrangements/Cells Counted in Blood or Tissue by FISH

C193844Cells with BCL2 Gene Rearrangements/Cells Counted in Blood or Tissue by FISH

C193845Cells with ALK Gene Rearrangements/Cells Counted in Blood or Tissue by FISH

C193846Cells with KMT2A Gene Rearrangements/Cells Counted in Blood or Tissue by FISH

C193847Cells with PDGFRB Gene Rearrangements/Cells Counted in Blood or Tissue by FISH

C193848Cells with IGH Gene Rearrangements/Cells Counted in Blood or Tissue by FISH

C193849Chromosome 8 Copy Number/Nucleus in Blood or Tissue by FISH

C193850Chromosome 3 Copy Number/Nucleus in Blood or Tissue by FISH

C193851MYB Gene Deletion [Presence] in Blood or Tissue by FISH

C193852MYB Gene Deletion [Interpretation] in Blood or Tissue by FISH Narrative

C193853Cells with MYB Gene Deletion/Cells Counted in Blood or Tissue by FISH

C193854FGFR1 Gene Rearrangements [Presence] in Blood or Tissue by FISH

C193855FGFR1 Gene Rearrangements [Interpretation] in Blood or Tissue by FISH Narrative

C193856Cells with FGFR1 Gene Rearrangements/Cells Counted in Blood or Tissue by FISH

C193857inv(2)(p21;p23)(EML4/ALK) Fusion Transcript [Presence] in Blood or Tissue by FISH

C193868PTEN Gene [Presence] in Cancer Specimen by FISH

C193869Chromosome Region 17p13.1 Deletion in Blood or Tissue by FISH

C193870Chromosome Region 6q22 Rearrangements in Tissue by FISH

C193871Chromosome Region Yp11.3 Deletion and/or Rearrangement in Blood or Tissue by FISH

C193872Chromosome Region 13q14 Deletion in Bone Marrow by FISH

C193873Chromosome 17p13.1 Deletion and 14q32 Rearrangements in Bone Marrow by FISH

C193874Chromosome Region 1q21 Duplication in Bone Marrow by FISH

C193875Chromosome Region 15q11-13 Deletion and Duplication Analysis in Amniotic Fluid or Chorionic Villus Sample by FISH

C193876Chromosome Region 16p13.3 Deletion in Blood or Tissue by FISH

C193877Chromosome Region 16p13.3 Deletion in Amniotic Fluid or Chorionic Villus Sample by FISH

C193878Chromosome Region 17p11.2 Deletion in Amniotic Fluid or Chorionic Villus Sample by FISH

C193879Chromosome Region 17p13.3 Deletion in Amniotic Fluid or Chorionic Villus Sample by FISH

C193880Chromosome Region 17p13.3 Deletion in Blood or Tissue by FISH

C193881Chromosome Region 1p36 Deletion in Blood or Tissue by FISH

C193882Chromosome Region 22q11.2 Deletion and Duplication Analysis in Amniotic Fluid or Chorionic Villus Sample by FISH

C193883Chromosome Region 22q11.2 Deletion and Duplication Analysis in Blood or Tissue by FISH

C193884Chromosome Region 7q11.23 Deletion in Amniotic Fluid or Chorionic Villus Sample by FISH

C193885Chromosome Region 7q11.23 Deletion in Blood or Tissue by FISH

C193886Chromosome Region 8q23.3-24.13 Deletion in Blood or Tissue by FISH

C193887Chromosome Region 1p Subtelomere and 1p36 Deletion and 1q25 Rearrangement in Blood or Tissue by FISH

C193888Chromosome 3 and 7 and 17 Aneuploidy and Chromosome Region 9p21 Deletion in Urine by FISH

C193889JAG1 Gene Deletion in Blood or Tissue by FISH

C193890Chromosome 12 Trisomy and Chromosome Region 11q22.3 and 13q14 and 17p13.1 Deletion in Blood or Tissue by FISH

C193891SRY Gene Deletion in Blood or Tissue by FISH

C193892Subtelomere Analysis in Bone Marrow by FISH

C193893Chromosome Region Xp22.33 and/or Yp11.32 Deletion and Duplication Analysis in Blood or Tissue by FISH

C193895Chromosome Painting Analysis in Blood or Tissue by FISH

C193908Cells with Chromosome Region 5q31 Deletion/Cells Counted in Bone Marrow by FISH

C193909Cells with Chromosome 12 Trisomy/Cells Counted in Blood or Tissue by FISH

C193910Cells with Chromosome Region 13q14 Deletion/Cells Counted in Blood or Tissue by FISH

C193911Cells with Chromosome Region 11q22.3 Deletion/Cells Counted in Blood or Tissue by FISH

C193912Cells with Chromosome Region 17p13.1 Deletion/Cells Counted in Blood or Tissue by FISH

C193913Chromosome Y Aneuploidy [Presence] in Amniotic Fluid or Chorionic Villus Sample by FISH

C193914Chromosome X Aneuploidy [Presence] in Amniotic Fluid or Chorionic Villus Sample by FISH

C193915Chromosome 21 Aneuploidy [Presence] in Amniotic Fluid or Chorionic Villus Sample by FISH

C193916Cells with Chromosome Region 5q31 Deletion/Cells Counted in Blood or Tissue by FISH

C193917Cells with Chromosome Region 7q31 Deletion/Cells Counted in Blood or Tissue by FISH

C193918Cells with Chromosome 7 Monosomy/Cells Counted in Blood or Tissue by FISH

C193925ERBB2 Gene Duplication [Presence] in Breast Cancer Specimen by FISH

C193933Cells with Chromosome 3 Monosomy/Cells Counted in Cancer Specimen by FISH

C193934Chromosome X and Y Aneuploidy in Blood or Tissue by FISH

C193937t(14;20)(q32;q12)(IGH/MAFB) Fusion Transcript in Blood or Tissue by FISH

C193938MET Gene Amplification in Blood or Tissue by FISH

C193939RET Gene Rearrangements in Blood or Tissue by FISH

C193947Chromosome 7 Copy Number/Nucleus in Blood or Tissue by FISH

C193948MET Gene Copy Number/Nucleus in Blood or Tissue by FISH

C193949MET Gene Copy Number/Chromosome 7 Copy Number in Blood or Tissue by FISH

C193952MYCN Gene Amplification in Blood or Tissue by FISH

C193953MYCN Gene Copy Number/Chromosome 2 Copy Number in Tissue by FISH

C193954MYCN Gene Copy Number/Nucleus in Tissue by FISH

C193955Chromosome 2 Copy Number/Nucleus in Tissue by FISH

C1939561p/1q Chromosome Deletion [Number Ratio] in Tissue by FISH

C193957Chromosome 1 Polysomy [Presence] in Tissue by FISH

C19395819q/19p Chromosome Deletion [Number Ratio] in Tissue by FISH

C193959Chromosome 19 Polysomy [Presence] in Tissue by FISH

C193960Chromosome 12 Copy Number/Nucleus in Tissue by FISH

C193961MDM2 Gene Copy Number/Nucleus in Tissue by FISH

C193962EWSR1 Gene Rearrangements in Tissue by FISH

C193963FOXO1 Gene Rearrangements in Tissue by FISH

C193964MDM2 Gene Amplification in Tissue by FISH

C193965MDM2 Gene Copy Number/Chromosome 12 Copy Number in Tissue by FISH

C193966SS18 Gene Rearrangements in Tissue by FISH

C193967Chromosome 13 and 15 and 16 and 18 and 21 and 22 and X and Y Aneuploidy in Products of Conception by FISH

C193968Chromosome 1q and 9 and 11 and 15 Aneuploidy and 13q Deletion in Bone Marrow by FISH

C193969Chromosome 9 and 11 and 15 Aneuploidy in Bone Marrow by FISH

C193970Chromosome Region 14q32 Rearrangements in Bone Marrow by FISH

C193971Chromosome Region 17p11.2 Deletion in Blood or Tissue by FISH

C1939724p16.3 Chromosome Deletion in Blood or Tissue by FISH

C1939735p15.2 (5p-) Chromosome Deletion [Identifier] in Blood or Tissue by FISH

C193975TFE3 Gene Rearrangements in Tissue by FISH

C193976TFEB Gene Rearrangements in Tissue by FISH

C193977ETV6 Gene Rearrangements in Blood or Bone Marrow by FISH

C193978FGFR2 Gene Rearrangements in Tissue by FISH

C193980ABL1 and ABL2 and PDGFRB Gene Rearrangements in Blood or Tissue by FISH

C193981ABL2 Gene Rearrangements in Blood or Tissue by FISH

C193982ERBB2 Gene Duplication in Tumor by FISH

C193988Plasma Cell Proliferation Analysis in Bone Marrow by FISH

Cross-system equivalences0

No cross-system equivalences mapped for this node.

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